We introduce a geometrical setting which seems promising for the study of computation in multiset rewriting systems, but could also be applied to register machines and other models of computation. This approach will be applied here to membrane systems (also known as P systems) without dynamical membrane creation. We discuss the role of maximum...
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March 3, 2016 (v1)PublicationUploaded on: December 4, 2022
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April 2, 2019 (v1)Publication
Membrane computing is a biologically inspired computational paradigm. Motivated by brane calculi we investigate membrane systems which differ from conventional membrane systems by the following features: (1) biomolecules (proteins) can move through the regions of the systems, and can attach onto (and de-attach from) membranes, and (2) membranes...
Uploaded on: December 5, 2022 -
April 2, 2019 (v1)Publication
We consider the idea of controlling the evolution of a membrane system. In particular, we investigate a model of membrane systems using promoted rules, where a string of promoters (called the control string) "travels" through the regions, activating the rules of the system. This control string is present in the skin region at the beginning of...
Uploaded on: March 27, 2023 -
April 2, 2019 (v1)Publication
Membrane computing is a biologically inspired computational paradigm. Motivated by brane calculi we investigate membrane systems which differ from conventional membrane systems by the following features: (1) biomolecules (proteins) can move through the regions of the systems, and can attach onto (and de-attach from) membranes, and (2) membranes...
Uploaded on: March 27, 2023 -
March 11, 2016 (v1)Publication
We are considering molecular dynamics and (sequential) membrane systems from the viewpoint of Markov chain theory. The first step is to understand the structure of the configuration space, with respect to communicating classes. Instead of a reachability analysis by traditional methods, we use the explicit monoidal structure of this space...
Uploaded on: December 4, 2022