The advent of new brain imaging techniques such as resting-state functional MRI (fMRI), has led to the need for new approaches to recover brain functional activations without a prior knowledge on the experimental paradigm, as it was the case for task-fMRI. Conventional methods, i.e. the general linear model, requires the knowledge of the task...
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May 28, 2020 (v1)PublicationUploaded on: December 4, 2022
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August 1, 2020 (v1)Journal article
Objective: To infer information flow in the white matter of the brain and recover cortical activity using functional MRI, diffusion MRI, and MEG without a manual selection of the white matter connections of interest. Approach: A Bayesian network which encodes the priors knowledge of possible brain states is built from imaging data. Diffusion...
Uploaded on: December 4, 2022 -
2022 (v1)Journal article
Context: Functional Magnetic Resonance Imaging (fMRI) is a non-invasive imaging technique that provides an indirect view into brain activity via the blood oxygen level dependent (BOLD) response. In particular, resting-state fMRI poses challenges to the recovery of brain activity without prior knowledge on the experimental paradigm, as it is the...
Uploaded on: December 3, 2022 -
August 14, 2020 (v1)Conference paper
International audience
Uploaded on: December 4, 2022 -
May 11, 2019 (v1)Conference paper
State-of-the-art techniques for denoising functional MRI (fMRI) images consider the problems of spatial and temporal regularization as decoupled tasks. In this work we propose a partial differential equations (PDEs)-based algorithm that acts directly on the 4-D fMRI image. Our approach is based on the idea that large image variations should be...
Uploaded on: December 4, 2022 -
June 9, 2019 (v1)Conference paper
International audience
Uploaded on: December 4, 2022 -
September 20, 2018 (v1)Conference paper
The architecture of the white matter is endowed with kissing and crossing bundles configurations. When these white matter tracts are reconstructed using diffusion MRI tractography, this systematically induces the reconstruction of many fiber tracts that are not coherent with the structure of the brain. The question on how to discriminate...
Uploaded on: December 4, 2022 -
June 14, 2018 (v1)Publication
Deconvolution methods are used to denoise the blood oxygen level-dependent (BOLD) response, the signal that forms the basis of functional MRI (fMRI). In this work we propose a novel approach based on a temporal regularized deconvolution of the BOLD fMRI signal with the least absolute shrinkage and selection operator (LASSO) model, ...
Uploaded on: December 4, 2022 -
July 17, 2018 (v1)Conference paper
In the context of functional MRI (fMRI), methods based on the deconvolution of the blood oxygenated level dependent (BOLD) signal have been developed to investigate the brain activity, without a need of a priori knowledge about activations occurrence [2]. In this work, we propose a novel temporal regularized deconvolution of the BOLD signal...
Uploaded on: December 4, 2022 -
November 20, 2017 (v1)Publication
Many techniques have been explored so far in the study of neural activations using the blood oxygenated level dependent (BOLD) signal. Among them, deconvolution methods have been developed in order to explore spontaneous brain activity when the brain is in resting-state. These techniques are powerful since they do not require a priori knowledge...
Uploaded on: March 25, 2023 -
June 17, 2018 (v1)Conference paper
Due to its ill-posed nature, tractography generates a significant number of false positive connections between brain regions [3]. To reduce the number of false positives, Daducci et al. [1] proposed the COMMIT framework, which has the goal of re-establishing the link between tractography and tissue microstructure. In this framework, the...
Uploaded on: December 4, 2022