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MORIN , Fabien

Last name: MORIN

First name: Fabien

December 11, 2013 (v1)

Publication

Metadata-only

GnS-PIPE: an optimized bionformatic pipeline to efficiently assess microbial taxonomic diversity of complex environments using high throughput sequencing technologies

Terrat, Sébastien Dequiedt, Samuel Lelievre, Mélanie

The rRNA genes (16S, 18S, ITS) are widely used to study microbial communities in soils, as they can be easily amplified from metagenomic DNA. Moreover, the recent development of high-throughput sequencing technologies allows the assessment of millions of sequences from a single metagenomic DNA. Some pipelines are already available (e.g. QIIME...

Uploaded on: February 22, 2023