Published April 4, 2018
| Version v1
Conference paper
An Analytical Fiber ODF Reconstruction in 3D Polarized Light Imaging
Contributors
Others:
- Computational Imaging of the Central Nervous System (ATHENA) ; Inria Sophia Antipolis - Méditerranée (CRISAM) ; Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)
- Dynamiques Cellulaire et Tissulaire - Interdisciplinarité, Modélisation & Microscopie (TIMC-IMAG-DyCTiM2) ; Techniques de l'Ingénierie Médicale et de la Complexité - Informatique, Mathématiques et Applications, Grenoble - UMR 5525 (TIMC-IMAG) ; Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])
- ANR-13-MONU-0009,MOSIFAH,Modélisation et simulation multimodales et multiéchelles de l'architecture des fibres myocardiques du cœur humain(2013)
Description
Three dimensional polarized light imaging (3D-PLI) utilizes the birefringence in postmortem tissue to map its spatial fiber structure at a submillimeter resolution. We propose an analytical method to compute the fiber orientation distribution function (ODF) from high-resolution vector data provided by 3D-PLI. This strategy enables the bridging of high resolution 3D-PLI to diffusion magnetic resonance imaging with relatively low spatial resolution. First, the fiber ODF is modeled as a sum of K orientations on the unit sphere and expanded with a high order spherical harmonics series. Then, the coefficients of the spherical harmonics are derived directly with the spherical Fourier transform. We quantitatively validate the accuracy of the reconstruction against synthetic data and show that we can recover complex fiber configurations in the human heart at different scales.
Abstract
International audienceAdditional details
Identifiers
- URL
- https://hal.inria.fr/hal-01688789
- URN
- urn:oai:HAL:hal-01688789v1
Origin repository
- Origin repository
- UNICA