Published 2021
| Version v1
Book section
Chapter 39: Guidelines for creating a user-friendly and open-access gene expression database for comparing embryonic development and regeneration in Nematostella vectensis
- Creators
- Croce, Olivier
- Röttinger, Eric
- Others:
- Institut de Recherche sur le Cancer et le Vieillissement (IRCAN) ; Université Nice Sophia Antipolis (1965 - 2019) (UNS) ; COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA)
- Institut Fédératif de Recherche - Ressources Marines (IFR MARRES) ; Université Côte d'Azur (UCA)
Description
The sea anemone Nematostella vectensis has emerged as a powerful research model to understand at the gene regulatory network level, to what extend regeneration recapitulates embryonic development. Such comparison involves massive transcriptomic analysis, a routine approach for identifying differential gene expression. Here we present a workflow to build a userfriendly, mineable and open-access database providing access to the scientific community to various RNAseq datasets.
Abstract
International audience
Additional details
- URL
- https://hal.archives-ouvertes.fr/hal-03437921
- URN
- urn:oai:HAL:hal-03437921v1
- Origin repository
- UNICA