Published December 2020
| Version v1
Journal article
Single-cell RNA-seq with spike-in cells enables accurate quantification of cell-specific drug effects in pancreatic islets
- Others:
- Research Center for Molecular Medicine of the Austrian Academy of Sciences [Vienna, Austria] (CeMM ) ; Austrian Academy of Sciences (OeAW)
- Medizinische Universität Wien = Medical University of Vienna
- CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090 Vienna, Austria
- Institut de Biologie Valrose (IBV) ; Université Nice Sophia Antipolis (1965 - 2019) (UNS) ; COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA)
- CeMM Research Center for Molecular Medicine [Vienna, Austria] ; Austrian Academy of Sciences (OeAW)
Description
Single-cell RNA-seq (scRNA-seq) is emerging as a powerful tool to dissect cell-specific effects of drug treatment in complex tissues. This application requires high levels of precision, robustness, and quantitative accuracy-beyond those achievable with existing methods for mainly qualitative single-cell analysis. Here, we establish the use of standardized reference cells as spike-in controls for accurate and robust dissection of single-cell drug responses.
Abstract
International audience
Additional details
- URL
- https://hal.archives-ouvertes.fr/hal-02902739
- URN
- urn:oai:HAL:hal-02902739v1
- Origin repository
- UNICA