Identification of Spatiotemporal Dispersion Electrograms in Atrial Fibrillation Ablation Using Machine Learning: A Comparative Study
- Others:
- Laboratoire d'Informatique, Signaux, et Systèmes de Sophia-Antipolis (I3S) / Equipe SIGNAL ; Signal, Images et Systèmes (Laboratoire I3S - SIS) ; Laboratoire d'Informatique, Signaux, et Systèmes de Sophia Antipolis (I3S) ; Université Nice Sophia Antipolis (1965 - 2019) (UNS) ; COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA)-Université Nice Sophia Antipolis (1965 - 2019) (UNS) ; COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA)-Laboratoire d'Informatique, Signaux, et Systèmes de Sophia Antipolis (I3S) ; Université Nice Sophia Antipolis (1965 - 2019) (UNS) ; COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA)-Université Nice Sophia Antipolis (1965 - 2019) (UNS) ; COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA)
- Federal Institute of Education, Science and Technology of Espírito Santo (IFES)
- Hôpital Pasteur [Nice] (CHU)
- Scalable and Pervasive softwARe and Knowledge Systems (Laboratoire I3S - SPARKS) ; Laboratoire d'Informatique, Signaux, et Systèmes de Sophia Antipolis (I3S) ; Université Nice Sophia Antipolis (1965 - 2019) (UNS) ; COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA)-Université Nice Sophia Antipolis (1965 - 2019) (UNS) ; COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA)
- Chair "IAblation" from 3IA Côte d'Azur (V. Zarzoso)
- ANR-15-IDEX-0001,UCA JEDI,Idex UCA JEDI(2015)
- ANR-19-P3IA-0002,3IA@cote d'azur,3IA Côte d'Azur(2019)
Description
Atrial Fibrillation (AF) is the most widespread sustained arrhythmia in clinical practice. A recent personalized AF therapy consists in ablating areas displaying spatiotemporal dispersion (STD) electrograms (EGM) with the use of catheters. Interventional cardiologists use a multipolar mapping catheter called PentaRay to identify visually atrial sites with STD pattern by visual inspection. In this contribution, we propose to automatize the identification of STD EGMs using machine learning while comparing several features. The aim is to design a data representation and an adapted classification algorithm for accurate EGM detection with affordable computational resources and low prediction time. Four data formats are con- sidered: 1) EGM matrices; 2) EGM plots; 3) three-dimensional EGM plots; 4) maximal voltage absolute values. Convolutional neural networks and transfer learning based on the VGG16 architecture are benchmarked. Classification results on the test set show that extracting features automatically with VGG16 is possible and yields comparable results to classifying raw EGM recordings with values of accuracy and AUC of 90%. However, the overall precision and F1 score are low (50%), which can be explained by the high class imbalance ratio. This issue is addressed with data augmentation. Due to its low computational cost, our solution can also be deployed in real time.
Abstract
In press
Abstract
International audience
Additional details
- URL
- https://hal.archives-ouvertes.fr/hal-03373043
- URN
- urn:oai:HAL:hal-03373043v1
- Origin repository
- UNICA