Traction force microscopy is a methodology that enables to estimate cellular forces from the measurement of the displacement field of an extracellular matrix (ECM)-mimicking hydrogel that a cell is mechanically interacting with. In this paper, a new inverse and physically-consistent methodology is developed and implemented in the context of 3D...
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October 3, 2022 (v1)PublicationUploaded on: March 24, 2023
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April 20, 2023 (v1)Publication
Traction force microscopy (TFM) allows to estimate tractions on the surface of cells when they mechanically interact with hydrogel substrates that mimic the extracellular matrix (ECM). The field of mechanobiology has a strong interest in using TFM in 3D in vitro models. However, there are a number of challenges that hamper the accuracy of 3D...
Uploaded on: April 29, 2023 -
September 28, 2022 (v1)Publication
We present TFMLAB, a MATLAB software package for 4D (x;y;z;t) Traction Force Microscopy (TFM). While various TFM computational workflows are available in the literature, open-source programs that are easy to use by researchers with limited technical experience and that can analyze 4D in vitro systems do not exist. TFMLAB integrates all the...
Uploaded on: December 4, 2022 -
January 22, 2024 (v1)Publication
In the last decade, cellular forces in three-dimensional hydrogels that mimic the extracellular matrix have been calculated by means of Traction Force Microscopy (TFM). However, characterizing the accuracy limits of a traction recovery method is critical to avoid obscuring physiological information due to traction recovery errors. So far, 3D...
Uploaded on: January 24, 2024 -
October 16, 2024 (v1)Publication
The conception of inverse methods in the context of Traction Force Microscopy (TFM) is influenced by multiple factors, such as nonlinear effects, dimensionality (2D/3D), and regularization/constraints, amongst others. Solving the inverse problem often requires the inversion of a matrix, and the presence of noise in the measured displacements...
Uploaded on: October 17, 2024 -
October 16, 2024 (v1)Publication
Collagen-based hydrogels are commonly used in mechanobiology to mimic the extracellular matrix. A quantitative analysis of the influence of collagen concentration and properties on the structure and mechanics of the hydrogels is essential for tailored design adjustments for specific in vitro conditions. We combined focused ion beam scanning...
Uploaded on: October 17, 2024